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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs199457 chr17:44795469 C/T LRRC37A4 chr17:43578685-43595516:- -0.6 -9.89 2.82E-16 Box Plot
THYM rs199498 chr17:44865603 A/G LOC644172 chr17:43677491-43679748:- 0.99 8.69 1.06E-13 Box Plot
THYM rs199498 chr17:44865603 A/G LRRC37A4 chr17:43578685-43595516:- -0.53 -7.54 2.83E-11 Box Plot
THYM rs199502 chr17:44862347 G/A LOC644172 chr17:43677491-43679748:- 0.94 9.24 7.01E-15 Box Plot
THYM rs199502 chr17:44862347 G/A LRRC37A4 chr17:43578685-43595516:- -0.53 -8.49 2.75E-13 Box Plot
THYM rs199503 chr17:44862162 G/A LOC644172 chr17:43677491-43679748:- 1.1 11.36 2.12E-19 Box Plot
THYM rs199503 chr17:44862162 G/A LRRC37A4 chr17:43578685-43595516:- -0.6 -9.74 5.9E-16 Box Plot
THYM rs199504 chr17:44861003 C/T LOC644172 chr17:43677491-43679748:- -1.03 -10.95 1.6E-18 Box Plot
THYM rs199504 chr17:44861003 C/T LRRC37A4 chr17:43578685-43595516:- 0.54 8.55 2.05E-13 Box Plot
THYM rs199505 chr17:44859410 A/G LOC644172 chr17:43677491-43679748:- -1.07 -11.07 8.83E-19 Box Plot
THYM rs199505 chr17:44859410 A/G LRRC37A4 chr17:43578685-43595516:- 0.56 8.92 3.29E-14 Box Plot
THYM rs199506 chr17:44859031 A/G LOC644172 chr17:43677491-43679748:- -1.07 -10.53 1.24E-17 Box Plot
THYM rs199506 chr17:44859031 A/G LRRC37A4 chr17:43578685-43595516:- 0.57 8.65 1.26E-13 Box Plot
THYM rs199507 chr17:44858855 A/G LOC644172 chr17:43677491-43679748:- -1.07 -11.07 8.83E-19 Box Plot
THYM rs199507 chr17:44858855 A/G LRRC37A4 chr17:43578685-43595516:- 0.56 8.92 3.29E-14 Box Plot